Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim4P70271 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.3□□□□□ -0.28
Pdlim4P70271 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pdlim4P70271 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.3□□□□□ -0.28
Pdlim4P70271 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Pdlim4P70271 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pdlim4P70271 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim4P70271 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Pdlim4P70271 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pdlim4P70271 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pdlim4P70271 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pdlim4P70271 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim4P70271 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pdlim4P70271 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pdlim4P70271 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Gm15794-201ENSMUST00000120182 631 ntBASIC13.28□□□□□ -0.28
Pdlim4P70271 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Gm36967-201ENSMUST00000193814 266 ntBASIC13.28□□□□□ -0.28
Pdlim4P70271 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pdlim4P70271 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pdlim4P70271 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pdlim4P70271 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim4P70271 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Pdlim4P70271 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pdlim4P70271 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim4P70271 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim4P70271 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pdlim4P70271 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pdlim4P70271 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Pdlim4P70271 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.27□□□□□ -0.29
Pdlim4P70271 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pdlim4P70271 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.27□□□□□ -0.29
Pdlim4P70271 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Pdlim4P70271 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms