Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.66■□□□□ 0.1
Lhx1P63006 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.66■□□□□ 0.1
Lhx1P63006 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lhx1P63006 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.66■□□□□ 0.1
Lhx1P63006 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lhx1P63006 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.65■□□□□ 0.1
Lhx1P63006 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Lhx1P63006 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.65■□□□□ 0.1
Lhx1P63006 Gm13418-201ENSMUST00000119097 944 ntBASIC15.65■□□□□ 0.1
Lhx1P63006 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Lhx1P63006 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Gm18733-201ENSMUST00000173950 856 ntBASIC15.65■□□□□ 0.1
Lhx1P63006 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Lhx1P63006 Gm18622-201ENSMUST00000219361 595 ntBASIC15.65■□□□□ 0.1
Lhx1P63006 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lhx1P63006 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.65■□□□□ 0.1
Lhx1P63006 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.65■□□□□ 0.1
Lhx1P63006 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lhx1P63006 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Lhx1P63006 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Gm25990-201ENSMUST00000102440 86 ntBASIC15.64■□□□□ 0.09
Lhx1P63006 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Lhx1P63006 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.64■□□□□ 0.09
Lhx1P63006 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.64■□□□□ 0.09
Lhx1P63006 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Lhx1P63006 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lhx1P63006 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.64■□□□□ 0.09
Lhx1P63006 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lhx1P63006 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Lhx1P63006 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Lhx1P63006 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lhx1P63006 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Lhx1P63006 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.63■□□□□ 0.09
Lhx1P63006 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.63■□□□□ 0.09
Lhx1P63006 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.63■□□□□ 0.09
Lhx1P63006 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Gm10060-201ENSMUST00000212002 111 ntBASIC15.63■□□□□ 0.09
Lhx1P63006 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.63■□□□□ 0.09
Lhx1P63006 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Lhx1P63006 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Lhx1P63006 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lhx1P63006 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Lhx1P63006 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.62■□□□□ 0.09
Lhx1P63006 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.62■□□□□ 0.09
Lhx1P63006 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Lhx1P63006 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lhx1P63006 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lhx1P63006 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms