Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ybx1P62960 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ybx1P62960 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ybx1P62960 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.32■□□□□ 0.2
Ybx1P62960 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ybx1P62960 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.32■□□□□ 0.2
Ybx1P62960 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.32■□□□□ 0.2
Ybx1P62960 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ybx1P62960 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.31■□□□□ 0.2
Ybx1P62960 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ybx1P62960 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ybx1P62960 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ybx1P62960 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.31■□□□□ 0.2
Ybx1P62960 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm8825-201ENSMUST00000182565 998 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm4518-201ENSMUST00000182638 718 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.31■□□□□ 0.2
Ybx1P62960 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.31■□□□□ 0.2
Ybx1P62960 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.31■□□□□ 0.2
Ybx1P62960 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ybx1P62960 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ybx1P62960 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ybx1P62960 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.3■□□□□ 0.2
Ybx1P62960 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ybx1P62960 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ybx1P62960 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.3■□□□□ 0.2
Ybx1P62960 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms