Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm6P62313 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm6P62313 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm6P62313 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm6P62313 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm6P62313 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Lsm6P62313 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Lsm6P62313 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Lsm6P62313 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.02□□□□□ -0.17
Lsm6P62313 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.02□□□□□ -0.17
Lsm6P62313 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm6P62313 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm6P62313 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm6P62313 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm6P62313 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm6P62313 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Lsm6P62313 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.01□□□□□ -0.17
Lsm6P62313 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm6P62313 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm6P62313 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm6P62313 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm6P62313 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm6P62313 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Lsm6P62313 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lsm6P62313 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Gm15794-201ENSMUST00000120182 631 ntBASIC14□□□□□ -0.17
Lsm6P62313 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14□□□□□ -0.17
Lsm6P62313 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14□□□□□ -0.17
Lsm6P62313 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lsm6P62313 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14□□□□□ -0.17
Lsm6P62313 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14□□□□□ -0.17
Lsm6P62313 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm6P62313 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lsm6P62313 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.99□□□□□ -0.17
Lsm6P62313 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Gm13312-201ENSMUST00000119631 718 ntBASIC13.99□□□□□ -0.17
Lsm6P62313 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.99□□□□□ -0.17
Lsm6P62313 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.99□□□□□ -0.17
Lsm6P62313 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Lsm6P62313 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lsm6P62313 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Lsm6P62313 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.99□□□□□ -0.17
Lsm6P62313 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lsm6P62313 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm6P62313 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms