Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps33bP59016 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Vps33bP59016 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.08■□□□□ 0.81
Vps33bP59016 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.08■□□□□ 0.81
Vps33bP59016 CT030684.1-201ENSMUST00000227292 914 ntBASIC20.08■□□□□ 0.81
Vps33bP59016 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Vps33bP59016 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33bP59016 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33bP59016 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33bP59016 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33bP59016 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33bP59016 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33bP59016 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33bP59016 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps33bP59016 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.07■□□□□ 0.8
Vps33bP59016 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.07■□□□□ 0.8
Vps33bP59016 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps33bP59016 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33bP59016 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Vps33bP59016 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33bP59016 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.06■□□□□ 0.8
Vps33bP59016 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33bP59016 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Vps33bP59016 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Vps33bP59016 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33bP59016 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33bP59016 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33bP59016 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33bP59016 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33bP59016 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Vps33bP59016 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps33bP59016 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Vps33bP59016 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Vps33bP59016 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.05■□□□□ 0.8
Vps33bP59016 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Vps33bP59016 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps33bP59016 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps33bP59016 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC20.05■□□□□ 0.8
Vps33bP59016 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Vps33bP59016 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps33bP59016 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vps33bP59016 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.05■□□□□ 0.8
Vps33bP59016 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vps33bP59016 Gm5779-201ENSMUST00000218467 910 ntBASIC20.05■□□□□ 0.8
Vps33bP59016 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps33bP59016 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Vps33bP59016 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps33bP59016 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps33bP59016 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps33bP59016 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Vps33bP59016 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.04■□□□□ 0.8
Vps33bP59016 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Vps33bP59016 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC20.04■□□□□ 0.8
Vps33bP59016 Gm13223-201ENSMUST00000118609 747 ntBASIC20.04■□□□□ 0.8
Vps33bP59016 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.04■□□□□ 0.8
Vps33bP59016 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.04■□□□□ 0.8
Vps33bP59016 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps33bP59016 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Vps33bP59016 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps33bP59016 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps33bP59016 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps33bP59016 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps33bP59016 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps33bP59016 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps33bP59016 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Vps33bP59016 Mir8102-201ENSMUST00000184148 139 ntBASIC20.03■□□□□ 0.8
Vps33bP59016 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps33bP59016 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps33bP59016 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps33bP59016 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Vps33bP59016 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps33bP59016 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Vps33bP59016 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps33bP59016 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Vps33bP59016 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms