Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.87■□□□□ 0.61
Rhbdl3P58873 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.87■□□□□ 0.61
Rhbdl3P58873 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Grk6-207ENSMUST00000225925 2769 ntBASIC18.87■□□□□ 0.61
Rhbdl3P58873 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rhbdl3P58873 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Gm13597-201ENSMUST00000121239 375 ntBASIC18.86■□□□□ 0.61
Rhbdl3P58873 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rhbdl3P58873 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.86■□□□□ 0.61
Rhbdl3P58873 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.86■□□□□ 0.61
Rhbdl3P58873 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rhbdl3P58873 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rhbdl3P58873 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.85■□□□□ 0.61
Rhbdl3P58873 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.85■□□□□ 0.61
Rhbdl3P58873 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rhbdl3P58873 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.85■□□□□ 0.61
Rhbdl3P58873 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Rhbdl3P58873 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rhbdl3P58873 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rhbdl3P58873 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rhbdl3P58873 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.83■□□□□ 0.61
Rhbdl3P58873 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rhbdl3P58873 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Rhbdl3P58873 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rhbdl3P58873 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rhbdl3P58873 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.83■□□□□ 0.6
Rhbdl3P58873 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rhbdl3P58873 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rhbdl3P58873 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms