Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn18P56857 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn18P56857 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Gm12644-201ENSMUST00000119935 606 ntBASIC14.3□□□□□ -0.12
Cldn18P56857 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.3□□□□□ -0.12
Cldn18P56857 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.3□□□□□ -0.12
Cldn18P56857 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn18P56857 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.3□□□□□ -0.12
Cldn18P56857 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Cldn18P56857 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.3□□□□□ -0.12
Cldn18P56857 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Cldn18P56857 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.3□□□□□ -0.12
Cldn18P56857 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.3□□□□□ -0.12
Cldn18P56857 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Cldn18P56857 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cldn18P56857 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cldn18P56857 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.29□□□□□ -0.12
Cldn18P56857 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cldn18P56857 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.29□□□□□ -0.12
Cldn18P56857 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.29□□□□□ -0.12
Cldn18P56857 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Gm17971-201ENSMUST00000190239 806 ntBASIC14.29□□□□□ -0.12
Cldn18P56857 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cldn18P56857 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cldn18P56857 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cldn18P56857 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cldn18P56857 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.28□□□□□ -0.12
Cldn18P56857 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.28□□□□□ -0.12
Cldn18P56857 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.28□□□□□ -0.12
Cldn18P56857 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Gm34391-201ENSMUST00000203706 907 ntBASIC14.28□□□□□ -0.12
Cldn18P56857 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.28□□□□□ -0.12
Cldn18P56857 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cldn18P56857 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cldn18P56857 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cldn18P56857 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.27□□□□□ -0.12
Cldn18P56857 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Cldn18P56857 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cldn18P56857 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cldn18P56857 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.27□□□□□ -0.13
Cldn18P56857 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cldn18P56857 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms