Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.87■□□□□ 0.61
Irf5P56477 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf5P56477 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf5P56477 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.87■□□□□ 0.61
Irf5P56477 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.87■□□□□ 0.61
Irf5P56477 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf5P56477 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf5P56477 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Irf5P56477 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Irf5P56477 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Irf5P56477 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf5P56477 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Irf5P56477 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Irf5P56477 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.86■□□□□ 0.61
Irf5P56477 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.86■□□□□ 0.61
Irf5P56477 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Irf5P56477 Gm11779-201ENSMUST00000118541 368 ntBASIC18.86■□□□□ 0.61
Irf5P56477 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.86■□□□□ 0.61
Irf5P56477 Mir5126-201ENSMUST00000175513 77 ntBASIC18.86■□□□□ 0.61
Irf5P56477 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Irf5P56477 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Irf5P56477 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Irf5P56477 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Irf5P56477 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Irf5P56477 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Irf5P56477 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.85■□□□□ 0.61
Irf5P56477 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.85■□□□□ 0.61
Irf5P56477 Gm5264-201ENSMUST00000190584 848 ntBASIC18.85■□□□□ 0.61
Irf5P56477 AC154532.1-201ENSMUST00000227860 965 ntBASIC18.85■□□□□ 0.61
Irf5P56477 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Irf5P56477 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Irf5P56477 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.84■□□□□ 0.61
Irf5P56477 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Irf5P56477 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.84■□□□□ 0.61
Irf5P56477 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.84■□□□□ 0.61
Irf5P56477 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.84■□□□□ 0.61
Irf5P56477 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Irf5P56477 AC153937.1-201ENSMUST00000218734 412 ntBASIC18.84■□□□□ 0.61
Irf5P56477 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Irf5P56477 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Irf5P56477 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Irf5P56477 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Irf5P56477 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Irf5P56477 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Irf5P56477 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf5P56477 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf5P56477 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Irf5P56477 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf5P56477 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.83■□□□□ 0.61
Irf5P56477 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf5P56477 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Irf5P56477 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Irf5P56477 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.83■□□□□ 0.6
Irf5P56477 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf5P56477 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Irf5P56477 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.83■□□□□ 0.6
Irf5P56477 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Irf5P56477 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf5P56477 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf5P56477 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.83■□□□□ 0.6
Irf5P56477 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Irf5P56477 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Irf5P56477 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms