Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.19■□□□□ 0.18
Ddx6P54823 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Mir8117-201ENSMUST00000184773 107 ntBASIC16.19■□□□□ 0.18
Ddx6P54823 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.19■□□□□ 0.18
Ddx6P54823 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx6P54823 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx6P54823 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ddx6P54823 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx6P54823 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx6P54823 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.18■□□□□ 0.18
Ddx6P54823 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.18■□□□□ 0.18
Ddx6P54823 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx6P54823 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.18■□□□□ 0.18
Ddx6P54823 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.18■□□□□ 0.18
Ddx6P54823 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ddx6P54823 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx6P54823 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ddx6P54823 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx6P54823 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx6P54823 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Ddx6P54823 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
Ddx6P54823 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.17■□□□□ 0.18
Ddx6P54823 Gm27702-201ENSMUST00000184512 56 ntBASIC16.17■□□□□ 0.18
Ddx6P54823 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ddx6P54823 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.17■□□□□ 0.18
Ddx6P54823 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.17■□□□□ 0.18
Ddx6P54823 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ddx6P54823 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ddx6P54823 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx6P54823 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ddx6P54823 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.16■□□□□ 0.18
Ddx6P54823 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ddx6P54823 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ddx6P54823 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Ddx6P54823 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.16■□□□□ 0.18
Ddx6P54823 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.16■□□□□ 0.18
Ddx6P54823 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Ddx6P54823 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.16■□□□□ 0.18
Ddx6P54823 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ddx6P54823 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ddx6P54823 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ddx6P54823 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms