Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm6376-201ENSMUST00000209407 580 ntBASIC16.18■□□□□ 0.18
Lhx3P50481 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.18■□□□□ 0.18
Lhx3P50481 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Gm10355-201ENSMUST00000097146 517 ntBASIC16.18■□□□□ 0.18
Lhx3P50481 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.18■□□□□ 0.18
Lhx3P50481 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.18■□□□□ 0.18
Lhx3P50481 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.18■□□□□ 0.18
Lhx3P50481 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Lhx3P50481 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lhx3P50481 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.17■□□□□ 0.18
Lhx3P50481 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Lhx3P50481 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx3P50481 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Lhx3P50481 Gm13418-201ENSMUST00000119097 944 ntBASIC16.17■□□□□ 0.18
Lhx3P50481 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx3P50481 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.17■□□□□ 0.18
Lhx3P50481 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lhx3P50481 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.17■□□□□ 0.18
Lhx3P50481 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.17■□□□□ 0.18
Lhx3P50481 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lhx3P50481 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lhx3P50481 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lhx3P50481 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lhx3P50481 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lhx3P50481 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.16■□□□□ 0.18
Lhx3P50481 Gm11780-201ENSMUST00000136880 516 ntBASIC16.16■□□□□ 0.18
Lhx3P50481 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.16■□□□□ 0.18
Lhx3P50481 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.16■□□□□ 0.18
Lhx3P50481 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lhx3P50481 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.16■□□□□ 0.18
Lhx3P50481 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lhx3P50481 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Lhx3P50481 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lhx3P50481 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lhx3P50481 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.15■□□□□ 0.18
Lhx3P50481 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.15■□□□□ 0.18
Lhx3P50481 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lhx3P50481 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Lhx3P50481 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.15■□□□□ 0.18
Lhx3P50481 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lhx3P50481 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lhx3P50481 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lhx3P50481 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lhx3P50481 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lhx3P50481 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lhx3P50481 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx3P50481 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lhx3P50481 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx3P50481 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms