Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Shmt1P50431 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Shmt1P50431 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.86■□□□□ 0.29
Shmt1P50431 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Shmt1P50431 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Shmt1P50431 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Shmt1P50431 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Shmt1P50431 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Shmt1P50431 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Shmt1P50431 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.85■□□□□ 0.29
Shmt1P50431 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.85■□□□□ 0.29
Shmt1P50431 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Shmt1P50431 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.85■□□□□ 0.29
Shmt1P50431 Gm12497-201ENSMUST00000138778 237 ntBASIC16.85■□□□□ 0.29
Shmt1P50431 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Shmt1P50431 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Shmt1P50431 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Shmt1P50431 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.85■□□□□ 0.29
Shmt1P50431 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.85■□□□□ 0.29
Shmt1P50431 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.85■□□□□ 0.29
Shmt1P50431 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.85■□□□□ 0.29
Shmt1P50431 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Shmt1P50431 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Shmt1P50431 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Shmt1P50431 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Shmt1P50431 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Gm8097-201ENSMUST00000117903 829 ntBASIC16.84■□□□□ 0.29
Shmt1P50431 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.84■□□□□ 0.29
Shmt1P50431 Gm6376-201ENSMUST00000209407 580 ntBASIC16.84■□□□□ 0.29
Shmt1P50431 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.84■□□□□ 0.29
Shmt1P50431 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Rps4l-201ENSMUST00000071745 943 ntBASIC16.84■□□□□ 0.29
Shmt1P50431 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Shmt1P50431 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Shmt1P50431 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shmt1P50431 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shmt1P50431 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shmt1P50431 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Shmt1P50431 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Shmt1P50431 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Shmt1P50431 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Shmt1P50431 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Gm6443-201ENSMUST00000203599 874 ntBASIC16.83■□□□□ 0.28
Shmt1P50431 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.83■□□□□ 0.28
Shmt1P50431 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Shmt1P50431 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Shmt1P50431 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt1P50431 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.82■□□□□ 0.28
Shmt1P50431 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt1P50431 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Shmt1P50431 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt1P50431 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.82■□□□□ 0.28
Shmt1P50431 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.82■□□□□ 0.28
Shmt1P50431 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt1P50431 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt1P50431 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Shmt1P50431 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Shmt1P50431 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.82■□□□□ 0.28
Shmt1P50431 Gm13418-201ENSMUST00000119097 944 ntBASIC16.82■□□□□ 0.28
Shmt1P50431 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.82■□□□□ 0.28
Shmt1P50431 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.82■□□□□ 0.28
Shmt1P50431 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms