Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx2-1P50220 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx2-1P50220 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Gm10698-201ENSMUST00000182663 604 ntBASIC13.27□□□□□ -0.29
Nkx2-1P50220 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Il3ra-202ENSMUST00000223589 738 ntBASIC13.27□□□□□ -0.29
Nkx2-1P50220 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.27□□□□□ -0.29
Nkx2-1P50220 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Actl10-202ENSMUST00000226583 1501 ntBASIC13.27□□□□□ -0.29
Nkx2-1P50220 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.27□□□□□ -0.29
Nkx2-1P50220 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-1P50220 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Gm7638-201ENSMUST00000121348 967 ntBASIC13.26□□□□□ -0.29
Nkx2-1P50220 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.26□□□□□ -0.29
Nkx2-1P50220 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-1P50220 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms