Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh2P43247 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh2P43247 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.48■□□□□ 0.23
Msh2P43247 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh2P43247 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh2P43247 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh2P43247 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Msh2P43247 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.48■□□□□ 0.23
Msh2P43247 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.48■□□□□ 0.23
Msh2P43247 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Msh2P43247 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.47■□□□□ 0.23
Msh2P43247 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Msh2P43247 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Gm13186-201ENSMUST00000118031 316 ntBASIC16.47■□□□□ 0.23
Msh2P43247 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Msh2P43247 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.47■□□□□ 0.23
Msh2P43247 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.47■□□□□ 0.23
Msh2P43247 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Msh2P43247 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Msh2P43247 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Msh2P43247 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.46■□□□□ 0.23
Msh2P43247 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Msh2P43247 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Msh2P43247 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Msh2P43247 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Msh2P43247 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Msh2P43247 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Msh2P43247 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.46■□□□□ 0.22
Msh2P43247 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Msh2P43247 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Msh2P43247 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
Msh2P43247 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.45■□□□□ 0.22
Msh2P43247 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Msh2P43247 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Msh2P43247 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Msh2P43247 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Gm6659-201ENSMUST00000174752 547 ntBASIC16.45■□□□□ 0.22
Msh2P43247 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.45■□□□□ 0.22
Msh2P43247 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.45■□□□□ 0.22
Msh2P43247 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Msh2P43247 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.45■□□□□ 0.22
Msh2P43247 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.45■□□□□ 0.22
Msh2P43247 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Msh2P43247 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.45■□□□□ 0.22
Msh2P43247 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Msh2P43247 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Msh2P43247 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Msh2P43247 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Msh2P43247 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh2P43247 Phf7-203ENSMUST00000226565 1971 ntBASIC16.44■□□□□ 0.22
Msh2P43247 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Msh2P43247 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms