Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-2P42586 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Nkx2-2P42586 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Nkx2-2P42586 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Gm15372-201ENSMUST00000120729 834 ntBASIC14.64□□□□□ -0.07
Nkx2-2P42586 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.64□□□□□ -0.07
Nkx2-2P42586 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.64□□□□□ -0.07
Nkx2-2P42586 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.64□□□□□ -0.07
Nkx2-2P42586 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.64□□□□□ -0.07
Nkx2-2P42586 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkx2-2P42586 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkx2-2P42586 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Gm15165-201ENSMUST00000118140 502 ntBASIC14.62□□□□□ -0.07
Nkx2-2P42586 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Gm17807-201ENSMUST00000186869 298 ntBASIC14.62□□□□□ -0.07
Nkx2-2P42586 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkx2-2P42586 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.61□□□□□ -0.07
Nkx2-2P42586 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.61□□□□□ -0.07
Nkx2-2P42586 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-2P42586 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.61□□□□□ -0.07
Nkx2-2P42586 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms