Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Sox6P40645 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.04■□□□□ -0
Sox6P40645 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.04■□□□□ -0
Sox6P40645 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sox6P40645 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.03■□□□□ -0
Sox6P40645 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Sox6P40645 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox6P40645 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.03■□□□□ -0
Sox6P40645 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sox6P40645 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.03■□□□□ -0
Sox6P40645 Mir1668-201ENSMUST00000184114 107 ntBASIC15.03■□□□□ -0
Sox6P40645 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.03■□□□□ -0
Sox6P40645 Gm18101-201ENSMUST00000215769 548 ntBASIC15.03■□□□□ -0
Sox6P40645 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sox6P40645 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Sox6P40645 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox6P40645 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox6P40645 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Sox6P40645 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.02■□□□□ -0
Sox6P40645 Gm10231-201ENSMUST00000181584 441 ntBASIC15.02■□□□□ -0
Sox6P40645 Gm27389-201ENSMUST00000183622 195 ntBASIC15.02■□□□□ -0
Sox6P40645 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Gm10175-202ENSMUST00000208752 441 ntBASIC15.02■□□□□ -0
Sox6P40645 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sox6P40645 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sox6P40645 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox6P40645 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sox6P40645 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox6P40645 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox6P40645 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox6P40645 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox6P40645 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox6P40645 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox6P40645 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox6P40645 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox6P40645 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sox6P40645 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Gm22697-201ENSMUST00000175194 63 ntBASIC15.01□□□□□ -0.01
Sox6P40645 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.01□□□□□ -0.01
Sox6P40645 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sox6P40645 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox6P40645 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox6P40645 Gm44616-201ENSMUST00000206417 1732 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms