Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.74■□□□□ 0.11
HmgclP38060 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HmgclP38060 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HmgclP38060 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HmgclP38060 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HmgclP38060 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HmgclP38060 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HmgclP38060 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
HmgclP38060 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Gm15372-201ENSMUST00000120729 834 ntBASIC15.73■□□□□ 0.11
HmgclP38060 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.73■□□□□ 0.11
HmgclP38060 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.73■□□□□ 0.11
HmgclP38060 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.73■□□□□ 0.11
HmgclP38060 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.73■□□□□ 0.11
HmgclP38060 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HmgclP38060 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.72■□□□□ 0.11
HmgclP38060 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
HmgclP38060 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.72■□□□□ 0.11
HmgclP38060 Gm6257-201ENSMUST00000163864 910 ntBASIC15.72■□□□□ 0.11
HmgclP38060 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HmgclP38060 Gm17807-201ENSMUST00000186869 298 ntBASIC15.72■□□□□ 0.11
HmgclP38060 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.72■□□□□ 0.11
HmgclP38060 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.72■□□□□ 0.11
HmgclP38060 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
HmgclP38060 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HmgclP38060 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.71■□□□□ 0.11
HmgclP38060 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HmgclP38060 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.71■□□□□ 0.11
HmgclP38060 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HmgclP38060 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HmgclP38060 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HmgclP38060 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HmgclP38060 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.71■□□□□ 0.1
HmgclP38060 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HmgclP38060 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HmgclP38060 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Gm15165-201ENSMUST00000118140 502 ntBASIC15.7■□□□□ 0.1
HmgclP38060 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.7■□□□□ 0.1
HmgclP38060 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HmgclP38060 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms