Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Rfc1P35601 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.88■□□□□ 0.29
Rfc1P35601 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.88■□□□□ 0.29
Rfc1P35601 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.88■□□□□ 0.29
Rfc1P35601 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.88■□□□□ 0.29
Rfc1P35601 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rfc1P35601 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.87■□□□□ 0.29
Rfc1P35601 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Rfc1P35601 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.87■□□□□ 0.29
Rfc1P35601 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.87■□□□□ 0.29
Rfc1P35601 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.87■□□□□ 0.29
Rfc1P35601 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rfc1P35601 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.87■□□□□ 0.29
Rfc1P35601 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rfc1P35601 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rfc1P35601 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.86■□□□□ 0.29
Rfc1P35601 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.86■□□□□ 0.29
Rfc1P35601 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Rfc1P35601 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.86■□□□□ 0.29
Rfc1P35601 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rfc1P35601 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfc1P35601 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.85■□□□□ 0.29
Rfc1P35601 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.85■□□□□ 0.29
Rfc1P35601 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Rfc1P35601 Gm13168-201ENSMUST00000121771 632 ntBASIC16.85■□□□□ 0.29
Rfc1P35601 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Gm17661-201ENSMUST00000170317 270 ntBASIC16.85■□□□□ 0.29
Rfc1P35601 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.85■□□□□ 0.29
Rfc1P35601 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rfc1P35601 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Rfc1P35601 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rfc1P35601 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rfc1P35601 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.84■□□□□ 0.29
Rfc1P35601 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfc1P35601 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfc1P35601 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms