Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.68□□□□□ -0.38
Rom1P32958 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.68□□□□□ -0.38
Rom1P32958 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rom1P32958 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.68□□□□□ -0.38
Rom1P32958 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Rom1P32958 Gm26571-201ENSMUST00000181399 666 ntBASIC12.68□□□□□ -0.38
Rom1P32958 Gm38027-201ENSMUST00000192315 235 ntBASIC12.68□□□□□ -0.38
Rom1P32958 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.68□□□□□ -0.38
Rom1P32958 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.68□□□□□ -0.38
Rom1P32958 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rom1P32958 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rom1P32958 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rom1P32958 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rom1P32958 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rom1P32958 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Rom1P32958 Gm13186-201ENSMUST00000118031 316 ntBASIC12.67□□□□□ -0.38
Rom1P32958 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.67□□□□□ -0.38
Rom1P32958 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Rom1P32958 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rom1P32958 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.66□□□□□ -0.38
Rom1P32958 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.66□□□□□ -0.38
Rom1P32958 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rom1P32958 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.66□□□□□ -0.38
Rom1P32958 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rom1P32958 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.66□□□□□ -0.38
Rom1P32958 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.66□□□□□ -0.38
Rom1P32958 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.66□□□□□ -0.38
Rom1P32958 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rom1P32958 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.66□□□□□ -0.38
Rom1P32958 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Rom1P32958 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.66□□□□□ -0.38
Rom1P32958 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.66□□□□□ -0.38
Rom1P32958 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.66□□□□□ -0.38
Rom1P32958 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rom1P32958 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rom1P32958 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.65□□□□□ -0.38
Rom1P32958 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.65□□□□□ -0.38
Rom1P32958 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms