Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col8a2P25318 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.32□□□□□ -0.28
Col8a2P25318 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col8a2P25318 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Col8a2P25318 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.32□□□□□ -0.28
Col8a2P25318 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Col8a2P25318 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col8a2P25318 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.32□□□□□ -0.28
Col8a2P25318 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.32□□□□□ -0.28
Col8a2P25318 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Col8a2P25318 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.32□□□□□ -0.28
Col8a2P25318 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col8a2P25318 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Col8a2P25318 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Gm7862-201ENSMUST00000121461 292 ntBASIC13.31□□□□□ -0.28
Col8a2P25318 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Gm25406-201ENSMUST00000157599 105 ntBASIC13.31□□□□□ -0.28
Col8a2P25318 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.31□□□□□ -0.28
Col8a2P25318 AW822252-206ENSMUST00000208904 237 ntBASIC13.31□□□□□ -0.28
Col8a2P25318 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.31□□□□□ -0.28
Col8a2P25318 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col8a2P25318 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Col8a2P25318 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.3□□□□□ -0.28
Col8a2P25318 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.3□□□□□ -0.28
Col8a2P25318 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col8a2P25318 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Gm8097-201ENSMUST00000117903 829 ntBASIC13.3□□□□□ -0.28
Col8a2P25318 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.3□□□□□ -0.28
Col8a2P25318 Mir6404-201ENSMUST00000183699 94 ntBASIC13.3□□□□□ -0.28
Col8a2P25318 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.3□□□□□ -0.28
Col8a2P25318 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.3□□□□□ -0.28
Col8a2P25318 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.3□□□□□ -0.28
Col8a2P25318 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col8a2P25318 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Col8a2P25318 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.3□□□□□ -0.28
Col8a2P25318 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col8a2P25318 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col8a2P25318 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Col8a2P25318 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col8a2P25318 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col8a2P25318 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col8a2P25318 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col8a2P25318 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms