Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cbx3P23198 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.61□□□□□ -0.07
Cbx3P23198 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cbx3P23198 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cbx3P23198 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.6□□□□□ -0.07
Cbx3P23198 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.6□□□□□ -0.07
Cbx3P23198 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.6□□□□□ -0.07
Cbx3P23198 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.6□□□□□ -0.07
Cbx3P23198 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cbx3P23198 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.59□□□□□ -0.07
Cbx3P23198 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Cbx3P23198 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cbx3P23198 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cbx3P23198 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cbx3P23198 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Gm6211-202ENSMUST00000167849 925 ntBASIC14.59□□□□□ -0.07
Cbx3P23198 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.59□□□□□ -0.07
Cbx3P23198 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Cbx3P23198 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cbx3P23198 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cbx3P23198 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.58□□□□□ -0.07
Cbx3P23198 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Cbx3P23198 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Gm29791-202ENSMUST00000207888 369 ntBASIC14.58□□□□□ -0.08
Cbx3P23198 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cbx3P23198 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Cbx3P23198 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cbx3P23198 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.58□□□□□ -0.08
Cbx3P23198 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cbx3P23198 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cbx3P23198 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cbx3P23198 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Cbx3P23198 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cbx3P23198 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Cbx3P23198 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.57□□□□□ -0.08
Cbx3P23198 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.57□□□□□ -0.08
Cbx3P23198 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.57□□□□□ -0.08
Cbx3P23198 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.57□□□□□ -0.08
Cbx3P23198 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cbx3P23198 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cbx3P23198 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms