Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Gm43371-201ENSMUST00000202838 1031 ntBASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf9P20334 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.02□□□□□ -0.32
Tnfrsf9P20334 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf9P20334 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf9P20334 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf9P20334 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf9P20334 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.02□□□□□ -0.32
Tnfrsf9P20334 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf9P20334 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Tnfrsf9P20334 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf9P20334 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Gm2213-201ENSMUST00000197485 688 ntBASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Tnfrsf9P20334 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Gm8000-201ENSMUST00000188378 592 ntBASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Gm6376-201ENSMUST00000209407 580 ntBASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Rps4l-201ENSMUST00000071745 943 ntBASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf9P20334 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf9P20334 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Tnfrsf9P20334 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf9P20334 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tnfrsf9P20334 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf9P20334 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf9P20334 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tnfrsf9P20334 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13□□□□□ -0.33
Tnfrsf9P20334 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms