Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.25□□□□□ -0.29
Cxcl1P12850 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.25□□□□□ -0.29
Cxcl1P12850 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Mir5122-201ENSMUST00000175004 89 ntBASIC13.25□□□□□ -0.29
Cxcl1P12850 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.25□□□□□ -0.29
Cxcl1P12850 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.25□□□□□ -0.29
Cxcl1P12850 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.25□□□□□ -0.29
Cxcl1P12850 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.25□□□□□ -0.29
Cxcl1P12850 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.25□□□□□ -0.29
Cxcl1P12850 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Cxcl1P12850 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cxcl1P12850 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.24□□□□□ -0.29
Cxcl1P12850 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cxcl1P12850 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Gm13474-201ENSMUST00000122466 815 ntBASIC13.24□□□□□ -0.29
Cxcl1P12850 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.24□□□□□ -0.29
Cxcl1P12850 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.24□□□□□ -0.29
Cxcl1P12850 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cxcl1P12850 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cxcl1P12850 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cxcl1P12850 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cxcl1P12850 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cxcl1P12850 Gm16061-201ENSMUST00000122167 857 ntBASIC13.23□□□□□ -0.29
Cxcl1P12850 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.23□□□□□ -0.29
Cxcl1P12850 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.23□□□□□ -0.29
Cxcl1P12850 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.23□□□□□ -0.29
Cxcl1P12850 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cxcl1P12850 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Cxcl1P12850 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cxcl1P12850 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cxcl1P12850 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.22□□□□□ -0.29
Cxcl1P12850 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Cxcl1P12850 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl1P12850 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl1P12850 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl1P12850 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cxcl1P12850 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cxcl1P12850 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl1P12850 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cxcl1P12850 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms