Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Col1a1P11087 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col1a1P11087 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.57■□□□□ 0.56
Col1a1P11087 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Col1a1P11087 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Col1a1P11087 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col1a1P11087 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col1a1P11087 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.57■□□□□ 0.56
Col1a1P11087 Gm22065-201ENSMUST00000103753 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm22066-201ENSMUST00000103761 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm24932-201ENSMUST00000103763 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm24115-201ENSMUST00000103799 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm22190-201ENSMUST00000103827 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm22191-201ENSMUST00000103831 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm24721-201ENSMUST00000103849 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm28018-201ENSMUST00000103869 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm26399-201ENSMUST00000103937 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col1a1P11087 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col1a1P11087 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Col1a1P11087 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm25349-201ENSMUST00000177728 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm23616-201ENSMUST00000177797 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm25871-201ENSMUST00000177816 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm24752-201ENSMUST00000178240 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm24496-201ENSMUST00000178287 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm25649-201ENSMUST00000178476 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm25548-201ENSMUST00000178681 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm23147-201ENSMUST00000178841 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm26095-201ENSMUST00000179270 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm22171-201ENSMUST00000179283 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm23936-201ENSMUST00000179354 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm22619-201ENSMUST00000179516 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm25255-201ENSMUST00000179579 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm24755-201ENSMUST00000179691 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm26506-201ENSMUST00000179692 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm25086-201ENSMUST00000179931 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm23243-201ENSMUST00000180047 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm24659-201ENSMUST00000180212 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm24169-201ENSMUST00000180244 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm23689-201ENSMUST00000180354 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm27359-201ENSMUST00000184153 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm27785-201ENSMUST00000184268 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm27466-201ENSMUST00000184396 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gm27703-201ENSMUST00000184836 110 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.57■□□□□ 0.56
Col1a1P11087 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col1a1P11087 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col1a1P11087 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.57■□□□□ 0.56
Col1a1P11087 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.56■□□□□ 0.56
Col1a1P11087 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.56■□□□□ 0.56
Col1a1P11087 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col1a1P11087 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col1a1P11087 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Col1a1P11087 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col1a1P11087 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.56■□□□□ 0.56
Col1a1P11087 Mir449b-201ENSMUST00000104833 80 ntBASIC18.56■□□□□ 0.56
Col1a1P11087 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col1a1P11087 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.56■□□□□ 0.56
Col1a1P11087 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Col1a1P11087 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col1a1P11087 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Col1a1P11087 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col1a1P11087 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col1a1P11087 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col1a1P11087 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col1a1P11087 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.55■□□□□ 0.56
Col1a1P11087 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.55■□□□□ 0.56
Col1a1P11087 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.55■□□□□ 0.56
Col1a1P11087 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col1a1P11087 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.55■□□□□ 0.56
Col1a1P11087 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col1a1P11087 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Col1a1P11087 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Col1a1P11087 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col1a1P11087 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col1a1P11087 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col1a1P11087 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col1a1P11087 Gm12008-201ENSMUST00000117791 755 ntBASIC18.54■□□□□ 0.56
Col1a1P11087 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col1a1P11087 Gm22175-201ENSMUST00000175007 78 ntBASIC18.54■□□□□ 0.56
Col1a1P11087 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.54■□□□□ 0.56
Col1a1P11087 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.54■□□□□ 0.56
Col1a1P11087 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col1a1P11087 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.54■□□□□ 0.56
Col1a1P11087 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col1a1P11087 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col1a1P11087 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms