Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.06□□□□□ -0.16
P04224 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
P04224 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.06□□□□□ -0.16
P04224 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
P04224 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
P04224 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
P04224 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.06□□□□□ -0.16
P04224 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
P04224 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
P04224 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
P04224 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
P04224 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.05□□□□□ -0.16
P04224 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.05□□□□□ -0.16
P04224 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.05□□□□□ -0.16
P04224 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.05□□□□□ -0.16
P04224 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
P04224 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
P04224 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
P04224 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.04□□□□□ -0.16
P04224 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
P04224 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
P04224 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
P04224 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.04□□□□□ -0.16
P04224 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
P04224 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
P04224 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
P04224 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
P04224 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.03□□□□□ -0.16
P04224 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 Prob1-201ENSMUST00000097619 3021 ntBASIC14.03□□□□□ -0.16
P04224 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.03□□□□□ -0.16
P04224 Gm37025-201ENSMUST00000195159 829 ntBASIC14.03□□□□□ -0.16
P04224 Gm43183-201ENSMUST00000200632 547 ntBASIC14.03□□□□□ -0.16
P04224 Gm20049-201ENSMUST00000219950 730 ntBASIC14.03□□□□□ -0.16
P04224 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
P04224 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.03□□□□□ -0.16
P04224 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.03□□□□□ -0.16
P04224 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
P04224 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
P04224 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms