Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Gm15165-201ENSMUST00000118140 502 ntBASIC13.38□□□□□ -0.27
Hoxa3P02831 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Mir8098-201ENSMUST00000184011 137 ntBASIC13.38□□□□□ -0.27
Hoxa3P02831 Gm44454-201ENSMUST00000198541 138 ntBASIC13.38□□□□□ -0.27
Hoxa3P02831 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.38□□□□□ -0.27
Hoxa3P02831 Gm44771-201ENSMUST00000206975 626 ntBASIC13.38□□□□□ -0.27
Hoxa3P02831 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.38□□□□□ -0.27
Hoxa3P02831 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.38□□□□□ -0.27
Hoxa3P02831 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.38□□□□□ -0.27
Hoxa3P02831 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Hoxa3P02831 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Hoxa3P02831 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Hoxa3P02831 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxa3P02831 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Hoxa3P02831 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hoxa3P02831 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Gm11452-201ENSMUST00000122376 690 ntBASIC13.37□□□□□ -0.27
Hoxa3P02831 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.37□□□□□ -0.27
Hoxa3P02831 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxa3P02831 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hoxa3P02831 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxa3P02831 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxa3P02831 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hoxa3P02831 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxa3P02831 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.36□□□□□ -0.27
Hoxa3P02831 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxa3P02831 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.36□□□□□ -0.27
Hoxa3P02831 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.36□□□□□ -0.27
Hoxa3P02831 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Hoxa3P02831 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxa3P02831 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxa3P02831 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hoxa3P02831 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.35□□□□□ -0.27
Hoxa3P02831 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.35□□□□□ -0.27
Hoxa3P02831 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hoxa3P02831 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.35□□□□□ -0.27
Hoxa3P02831 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.35□□□□□ -0.27
Hoxa3P02831 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.35□□□□□ -0.27
Hoxa3P02831 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxa3P02831 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms