Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Gm16198-201ENSMUST00000118766 670 ntBASIC19.49■□□□□ 0.71
Col4a1P02463 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.49■□□□□ 0.71
Col4a1P02463 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.49■□□□□ 0.71
Col4a1P02463 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.49■□□□□ 0.71
Col4a1P02463 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Col4a1P02463 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Col4a1P02463 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Col4a1P02463 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.48■□□□□ 0.71
Col4a1P02463 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a1P02463 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a1P02463 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Col4a1P02463 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a1P02463 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a1P02463 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a1P02463 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.48■□□□□ 0.71
Col4a1P02463 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.48■□□□□ 0.71
Col4a1P02463 Mir6956-201ENSMUST00000183598 62 ntBASIC19.48■□□□□ 0.71
Col4a1P02463 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.48■□□□□ 0.71
Col4a1P02463 Thap2-203ENSMUST00000218989 527 ntBASIC19.48■□□□□ 0.71
Col4a1P02463 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.48■□□□□ 0.71
Col4a1P02463 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a1P02463 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Col4a1P02463 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.48■□□□□ 0.71
Col4a1P02463 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col4a1P02463 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Col4a1P02463 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Col4a1P02463 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Col4a1P02463 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Rpph1-201ENSMUST00000175096 319 ntBASIC19.47■□□□□ 0.71
Col4a1P02463 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col4a1P02463 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Gm43125-201ENSMUST00000201724 730 ntBASIC19.46■□□□□ 0.71
Col4a1P02463 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.46■□□□□ 0.71
Col4a1P02463 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.46■□□□□ 0.71
Col4a1P02463 Gm7063-201ENSMUST00000186840 981 ntBASIC19.46■□□□□ 0.71
Col4a1P02463 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col4a1P02463 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col4a1P02463 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Col4a1P02463 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.45■□□□□ 0.7
Col4a1P02463 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
Col4a1P02463 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.45■□□□□ 0.7
Col4a1P02463 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col4a1P02463 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Col4a1P02463 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.45■□□□□ 0.7
Col4a1P02463 Gm17271-201ENSMUST00000165535 355 ntBASIC19.45■□□□□ 0.7
Col4a1P02463 Gm27301-201ENSMUST00000184012 127 ntBASIC19.45■□□□□ 0.7
Col4a1P02463 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.45■□□□□ 0.7
Col4a1P02463 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col4a1P02463 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col4a1P02463 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a1P02463 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a1P02463 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a1P02463 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col4a1P02463 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col4a1P02463 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms