Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.52■□□□□ 0.24
CopeO89079 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.52■□□□□ 0.24
CopeO89079 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.52■□□□□ 0.24
CopeO89079 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.52■□□□□ 0.24
CopeO89079 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.52■□□□□ 0.24
CopeO89079 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CopeO89079 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CopeO89079 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CopeO89079 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CopeO89079 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.52■□□□□ 0.23
CopeO89079 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CopeO89079 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CopeO89079 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CopeO89079 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CopeO89079 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CopeO89079 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CopeO89079 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CopeO89079 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
CopeO89079 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.51■□□□□ 0.23
CopeO89079 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.51■□□□□ 0.23
CopeO89079 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.51■□□□□ 0.23
CopeO89079 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.51■□□□□ 0.23
CopeO89079 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CopeO89079 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.5■□□□□ 0.23
CopeO89079 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.5■□□□□ 0.23
CopeO89079 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CopeO89079 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.5■□□□□ 0.23
CopeO89079 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CopeO89079 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CopeO89079 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CopeO89079 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CopeO89079 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CopeO89079 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.49■□□□□ 0.23
CopeO89079 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CopeO89079 Gm16061-201ENSMUST00000122167 857 ntBASIC16.49■□□□□ 0.23
CopeO89079 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CopeO89079 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CopeO89079 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CopeO89079 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms