Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.39■□□□□ 0.21
Syn1O88935 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.39■□□□□ 0.21
Syn1O88935 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Syn1O88935 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Syn1O88935 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Syn1O88935 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Syn1O88935 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Syn1O88935 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.38■□□□□ 0.21
Syn1O88935 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Syn1O88935 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.38■□□□□ 0.21
Syn1O88935 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Syn1O88935 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.38■□□□□ 0.21
Syn1O88935 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syn1O88935 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Syn1O88935 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.37■□□□□ 0.21
Syn1O88935 Gm13823-201ENSMUST00000119930 345 ntBASIC16.37■□□□□ 0.21
Syn1O88935 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.37■□□□□ 0.21
Syn1O88935 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Syn1O88935 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.37■□□□□ 0.21
Syn1O88935 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Syn1O88935 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.37■□□□□ 0.21
Syn1O88935 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.37■□□□□ 0.21
Syn1O88935 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Syn1O88935 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.36■□□□□ 0.21
Syn1O88935 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.36■□□□□ 0.21
Syn1O88935 Gm11745-201ENSMUST00000121669 448 ntBASIC16.36■□□□□ 0.21
Syn1O88935 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.36■□□□□ 0.21
Syn1O88935 Gm5866-201ENSMUST00000177881 973 ntBASIC16.36■□□□□ 0.21
Syn1O88935 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.36■□□□□ 0.21
Syn1O88935 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Syn1O88935 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Syn1O88935 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.36■□□□□ 0.21
Syn1O88935 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Syn1O88935 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.35■□□□□ 0.21
Syn1O88935 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.35■□□□□ 0.21
Syn1O88935 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Syn1O88935 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.35■□□□□ 0.21
Syn1O88935 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Syn1O88935 Gm43474-201ENSMUST00000196415 774 ntBASIC16.35■□□□□ 0.21
Syn1O88935 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.35■□□□□ 0.21
Syn1O88935 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms