Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hdac3O88895 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.31□□□□□ -0.12
Hdac3O88895 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.31□□□□□ -0.12
Hdac3O88895 Gm10231-201ENSMUST00000181584 441 ntBASIC14.31□□□□□ -0.12
Hdac3O88895 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.31□□□□□ -0.12
Hdac3O88895 Gm10175-202ENSMUST00000208752 441 ntBASIC14.31□□□□□ -0.12
Hdac3O88895 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.31□□□□□ -0.12
Hdac3O88895 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Gm10566-201ENSMUST00000086739 996 ntBASIC14.31□□□□□ -0.12
Hdac3O88895 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hdac3O88895 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.31□□□□□ -0.12
Hdac3O88895 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.31□□□□□ -0.12
Hdac3O88895 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac3O88895 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Hdac3O88895 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hdac3O88895 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.3□□□□□ -0.12
Hdac3O88895 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.3□□□□□ -0.12
Hdac3O88895 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hdac3O88895 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.3□□□□□ -0.12
Hdac3O88895 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hdac3O88895 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hdac3O88895 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac3O88895 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hdac3O88895 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.29□□□□□ -0.12
Hdac3O88895 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.29□□□□□ -0.12
Hdac3O88895 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.29□□□□□ -0.12
Hdac3O88895 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.29□□□□□ -0.12
Hdac3O88895 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Gm18421-201ENSMUST00000204122 625 ntBASIC14.29□□□□□ -0.12
Hdac3O88895 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hdac3O88895 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Hdac3O88895 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Hdac3O88895 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac3O88895 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms