Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sh2d1aO88890 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sh2d1aO88890 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Gm9987-201ENSMUST00000069768 567 ntBASIC11.33□□□□□ -0.6
Sh2d1aO88890 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sh2d1aO88890 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.32□□□□□ -0.6
Sh2d1aO88890 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.32□□□□□ -0.6
Sh2d1aO88890 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.32□□□□□ -0.6
Sh2d1aO88890 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Sh2d1aO88890 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sh2d1aO88890 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sh2d1aO88890 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sh2d1aO88890 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms