Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.25□□□□□ -0.13
CcnkO88874 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.25□□□□□ -0.13
CcnkO88874 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CcnkO88874 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CcnkO88874 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CcnkO88874 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.24□□□□□ -0.13
CcnkO88874 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Gm27000-201ENSMUST00000182943 842 ntBASIC14.24□□□□□ -0.13
CcnkO88874 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.24□□□□□ -0.13
CcnkO88874 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.24□□□□□ -0.13
CcnkO88874 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CcnkO88874 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CcnkO88874 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Asic1-205ENSMUST00000228185 1818 ntBASIC14.24□□□□□ -0.13
CcnkO88874 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CcnkO88874 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.24□□□□□ -0.13
CcnkO88874 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CcnkO88874 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CcnkO88874 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.24□□□□□ -0.13
CcnkO88874 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CcnkO88874 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CcnkO88874 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CcnkO88874 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.23□□□□□ -0.13
CcnkO88874 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CcnkO88874 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.23□□□□□ -0.13
CcnkO88874 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.23□□□□□ -0.13
CcnkO88874 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.23□□□□□ -0.13
CcnkO88874 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.23□□□□□ -0.13
CcnkO88874 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CcnkO88874 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CcnkO88874 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CcnkO88874 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CcnkO88874 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
CcnkO88874 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CcnkO88874 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.22□□□□□ -0.13
CcnkO88874 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CcnkO88874 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.22□□□□□ -0.13
CcnkO88874 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.22□□□□□ -0.13
CcnkO88874 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CcnkO88874 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CcnkO88874 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms