Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Gm13036-201ENSMUST00000117799 748 ntBASIC15.31■□□□□ 0.04
Best1O88870 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.31■□□□□ 0.04
Best1O88870 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Best1O88870 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.31■□□□□ 0.04
Best1O88870 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Gm18206-201ENSMUST00000207027 926 ntBASIC15.31■□□□□ 0.04
Best1O88870 AW822252-206ENSMUST00000208904 237 ntBASIC15.31■□□□□ 0.04
Best1O88870 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.31■□□□□ 0.04
Best1O88870 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Best1O88870 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Best1O88870 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Best1O88870 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Best1O88870 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Best1O88870 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.3■□□□□ 0.04
Best1O88870 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.3■□□□□ 0.04
Best1O88870 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Best1O88870 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Best1O88870 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Best1O88870 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Best1O88870 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.29■□□□□ 0.04
Best1O88870 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.29■□□□□ 0.04
Best1O88870 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.29■□□□□ 0.04
Best1O88870 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.29■□□□□ 0.04
Best1O88870 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.29■□□□□ 0.04
Best1O88870 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.29■□□□□ 0.04
Best1O88870 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Gm15590-201ENSMUST00000078419 552 ntBASIC15.29■□□□□ 0.04
Best1O88870 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Best1O88870 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Best1O88870 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Best1O88870 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Best1O88870 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.28■□□□□ 0.04
Best1O88870 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.28■□□□□ 0.04
Best1O88870 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.28■□□□□ 0.04
Best1O88870 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Best1O88870 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.27■□□□□ 0.04
Best1O88870 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.27■□□□□ 0.04
Best1O88870 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Best1O88870 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.27■□□□□ 0.04
Best1O88870 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms