Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ClppO88696 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.56■□□□□ 0.08
ClppO88696 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.56■□□□□ 0.08
ClppO88696 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ClppO88696 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ClppO88696 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ClppO88696 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.55■□□□□ 0.08
ClppO88696 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.55■□□□□ 0.08
ClppO88696 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.55■□□□□ 0.08
ClppO88696 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.55■□□□□ 0.08
ClppO88696 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
ClppO88696 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ClppO88696 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ClppO88696 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ClppO88696 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ClppO88696 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.54■□□□□ 0.08
ClppO88696 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.54■□□□□ 0.08
ClppO88696 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.54■□□□□ 0.08
ClppO88696 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
ClppO88696 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ClppO88696 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Gm44454-201ENSMUST00000198541 138 ntBASIC15.54■□□□□ 0.08
ClppO88696 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.54■□□□□ 0.08
ClppO88696 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.54■□□□□ 0.08
ClppO88696 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
ClppO88696 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
ClppO88696 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ClppO88696 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ClppO88696 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.53■□□□□ 0.08
ClppO88696 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.53■□□□□ 0.08
ClppO88696 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ClppO88696 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ClppO88696 Gm12644-201ENSMUST00000119935 606 ntBASIC15.53■□□□□ 0.08
ClppO88696 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Gm5864-201ENSMUST00000202263 970 ntBASIC15.53■□□□□ 0.08
ClppO88696 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.53■□□□□ 0.08
ClppO88696 Rps4l-201ENSMUST00000071745 943 ntBASIC15.53■□□□□ 0.08
ClppO88696 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ClppO88696 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.53■□□□□ 0.08
ClppO88696 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ClppO88696 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.53■□□□□ 0.08
ClppO88696 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ClppO88696 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ClppO88696 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ClppO88696 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ClppO88696 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms