Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops6O88545 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cops6O88545 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops6O88545 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops6O88545 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops6O88545 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops6O88545 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops6O88545 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops6O88545 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cops6O88545 Gm4899-201ENSMUST00000178708 719 ntBASIC19.45■□□□□ 0.7
Cops6O88545 Gm2756-201ENSMUST00000195851 400 ntBASIC19.45■□□□□ 0.7
Cops6O88545 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.45■□□□□ 0.7
Cops6O88545 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.45■□□□□ 0.7
Cops6O88545 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.45■□□□□ 0.7
Cops6O88545 Gm10175-201ENSMUST00000086013 645 ntBASIC19.45■□□□□ 0.7
Cops6O88545 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cops6O88545 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cops6O88545 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cops6O88545 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cops6O88545 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cops6O88545 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.44■□□□□ 0.7
Cops6O88545 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.44■□□□□ 0.7
Cops6O88545 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cops6O88545 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops6O88545 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.43■□□□□ 0.7
Cops6O88545 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.43■□□□□ 0.7
Cops6O88545 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Gm23935-201ENSMUST00000102303 57 ntBASIC19.43■□□□□ 0.7
Cops6O88545 Gm24270-201ENSMUST00000102326 57 ntBASIC19.43■□□□□ 0.7
Cops6O88545 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.43■□□□□ 0.7
Cops6O88545 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.43■□□□□ 0.7
Cops6O88545 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.43■□□□□ 0.7
Cops6O88545 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.43■□□□□ 0.7
Cops6O88545 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Gm24245-201ENSMUST00000157318 57 ntBASIC19.43■□□□□ 0.7
Cops6O88545 Gm25911-201ENSMUST00000157621 56 ntBASIC19.43■□□□□ 0.7
Cops6O88545 Gm24513-201ENSMUST00000174964 138 ntBASIC19.43■□□□□ 0.7
Cops6O88545 Gm27300-201ENSMUST00000184085 97 ntBASIC19.43■□□□□ 0.7
Cops6O88545 Gm27335-201ENSMUST00000184758 97 ntBASIC19.43■□□□□ 0.7
Cops6O88545 Gm27397-201ENSMUST00000184997 107 ntBASIC19.43■□□□□ 0.7
Cops6O88545 Gm19164-201ENSMUST00000210667 640 ntBASIC19.43■□□□□ 0.7
Cops6O88545 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cops6O88545 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Cops6O88545 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops6O88545 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cops6O88545 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.42■□□□□ 0.7
Cops6O88545 Mir3113-201ENSMUST00000175478 76 ntBASIC19.42■□□□□ 0.7
Cops6O88545 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.42■□□□□ 0.7
Cops6O88545 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Cops6O88545 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops6O88545 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops6O88545 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops6O88545 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops6O88545 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops6O88545 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cops6O88545 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Cops6O88545 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops6O88545 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops6O88545 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cops6O88545 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms