Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops4O88544 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.77□□□□□ -0.04
Cops4O88544 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Cops4O88544 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops4O88544 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops4O88544 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops4O88544 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.77□□□□□ -0.05
Cops4O88544 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.77□□□□□ -0.05
Cops4O88544 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.77□□□□□ -0.05
Cops4O88544 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cops4O88544 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cops4O88544 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cops4O88544 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops4O88544 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops4O88544 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Cops4O88544 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops4O88544 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cops4O88544 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cops4O88544 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cops4O88544 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.76□□□□□ -0.05
Cops4O88544 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cops4O88544 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cops4O88544 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cops4O88544 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cops4O88544 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.76□□□□□ -0.05
Cops4O88544 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Cops4O88544 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops4O88544 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.76□□□□□ -0.05
Cops4O88544 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cops4O88544 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.75□□□□□ -0.05
Cops4O88544 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.75□□□□□ -0.05
Cops4O88544 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.75□□□□□ -0.05
Cops4O88544 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.75□□□□□ -0.05
Cops4O88544 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cops4O88544 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.75□□□□□ -0.05
Cops4O88544 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cops4O88544 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.75□□□□□ -0.05
Cops4O88544 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.75□□□□□ -0.05
Cops4O88544 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.75□□□□□ -0.05
Cops4O88544 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops4O88544 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cops4O88544 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops4O88544 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms