Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm27785-201ENSMUST00000184268 110 ntBASIC20.67■□□□□ 0.9
Nid2O88322 Gm27466-201ENSMUST00000184396 110 ntBASIC20.67■□□□□ 0.9
Nid2O88322 Gm27703-201ENSMUST00000184836 110 ntBASIC20.67■□□□□ 0.9
Nid2O88322 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.67■□□□□ 0.9
Nid2O88322 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nid2O88322 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nid2O88322 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.67■□□□□ 0.9
Nid2O88322 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nid2O88322 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nid2O88322 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nid2O88322 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.67■□□□□ 0.9
Nid2O88322 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Nid2O88322 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nid2O88322 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nid2O88322 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nid2O88322 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.66■□□□□ 0.9
Nid2O88322 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nid2O88322 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nid2O88322 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nid2O88322 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.66■□□□□ 0.9
Nid2O88322 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nid2O88322 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC20.66■□□□□ 0.9
Nid2O88322 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nid2O88322 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nid2O88322 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Nid2O88322 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.66■□□□□ 0.9
Nid2O88322 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nid2O88322 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.65■□□□□ 0.9
Nid2O88322 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.65■□□□□ 0.9
Nid2O88322 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.65■□□□□ 0.9
Nid2O88322 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nid2O88322 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nid2O88322 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC20.65■□□□□ 0.9
Nid2O88322 Gm12008-201ENSMUST00000117791 755 ntBASIC20.65■□□□□ 0.9
Nid2O88322 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC20.65■□□□□ 0.9
Nid2O88322 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nid2O88322 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.65■□□□□ 0.9
Nid2O88322 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nid2O88322 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nid2O88322 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nid2O88322 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.65■□□□□ 0.9
Nid2O88322 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nid2O88322 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Nid2O88322 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nid2O88322 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nid2O88322 Gm7774-201ENSMUST00000200064 533 ntBASIC20.64■□□□□ 0.89
Nid2O88322 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nid2O88322 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.64■□□□□ 0.89
Nid2O88322 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nid2O88322 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nid2O88322 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nid2O88322 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nid2O88322 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nid2O88322 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC20.63■□□□□ 0.89
Nid2O88322 Gm16198-201ENSMUST00000118766 670 ntBASIC20.63■□□□□ 0.89
Nid2O88322 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.63■□□□□ 0.89
Nid2O88322 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC20.63■□□□□ 0.89
Nid2O88322 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC20.63■□□□□ 0.89
Nid2O88322 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nid2O88322 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Nid2O88322 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.63■□□□□ 0.89
Nid2O88322 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.63■□□□□ 0.89
Nid2O88322 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.63■□□□□ 0.89
Nid2O88322 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid2O88322 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.62■□□□□ 0.89
Nid2O88322 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.62■□□□□ 0.89
Nid2O88322 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.62■□□□□ 0.89
Nid2O88322 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid2O88322 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.61■□□□□ 0.89
Nid2O88322 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nid2O88322 Gm9385-201ENSMUST00000117563 472 ntBASIC20.61■□□□□ 0.89
Nid2O88322 Gm12428-201ENSMUST00000119844 727 ntBASIC20.61■□□□□ 0.89
Nid2O88322 Gm10253-201ENSMUST00000194270 940 ntBASIC20.61■□□□□ 0.89
Nid2O88322 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nid2O88322 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nid2O88322 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nid2O88322 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms