Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Pdlim1O70400 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.76■□□□□ 0.11
Pdlim1O70400 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.76■□□□□ 0.11
Pdlim1O70400 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.76■□□□□ 0.11
Pdlim1O70400 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Birc2-201ENSMUST00000054878 378 ntBASIC15.76■□□□□ 0.11
Pdlim1O70400 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pdlim1O70400 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Pdlim1O70400 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.75■□□□□ 0.11
Pdlim1O70400 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Pdlim1O70400 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.75■□□□□ 0.11
Pdlim1O70400 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.75■□□□□ 0.11
Pdlim1O70400 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pdlim1O70400 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pdlim1O70400 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Pdlim1O70400 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.74■□□□□ 0.11
Pdlim1O70400 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Gm12497-201ENSMUST00000138778 237 ntBASIC15.74■□□□□ 0.11
Pdlim1O70400 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.74■□□□□ 0.11
Pdlim1O70400 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.74■□□□□ 0.11
Pdlim1O70400 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.74■□□□□ 0.11
Pdlim1O70400 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pdlim1O70400 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.73■□□□□ 0.11
Pdlim1O70400 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.73■□□□□ 0.11
Pdlim1O70400 Gm17971-201ENSMUST00000190239 806 ntBASIC15.73■□□□□ 0.11
Pdlim1O70400 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pdlim1O70400 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Pdlim1O70400 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pdlim1O70400 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
Pdlim1O70400 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Pdlim1O70400 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.72■□□□□ 0.11
Pdlim1O70400 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.72■□□□□ 0.11
Pdlim1O70400 Gm34391-201ENSMUST00000203706 907 ntBASIC15.72■□□□□ 0.11
Pdlim1O70400 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.72■□□□□ 0.11
Pdlim1O70400 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Pdlim1O70400 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pdlim1O70400 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms