Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.89□□□□□ -0.51
Rpl35aO55142 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.89□□□□□ -0.51
Rpl35aO55142 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.89□□□□□ -0.51
Rpl35aO55142 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rpl35aO55142 Gm17971-201ENSMUST00000190239 806 ntBASIC11.89□□□□□ -0.51
Rpl35aO55142 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.89□□□□□ -0.51
Rpl35aO55142 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Rpl35aO55142 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Rpl35aO55142 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.89□□□□□ -0.51
Rpl35aO55142 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl35aO55142 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Rpl35aO55142 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.88□□□□□ -0.51
Rpl35aO55142 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl35aO55142 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rpl35aO55142 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.88□□□□□ -0.51
Rpl35aO55142 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl35aO55142 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl35aO55142 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.88□□□□□ -0.51
Rpl35aO55142 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.88□□□□□ -0.51
Rpl35aO55142 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl35aO55142 Gm12895-201ENSMUST00000122214 226 ntBASIC11.88□□□□□ -0.51
Rpl35aO55142 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.88□□□□□ -0.51
Rpl35aO55142 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl35aO55142 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl35aO55142 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rpl35aO55142 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl35aO55142 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl35aO55142 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rpl35aO55142 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl35aO55142 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Rprl3-201ENSMUST00000157400 290 ntBASIC11.87□□□□□ -0.51
Rpl35aO55142 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Gm27741-201ENSMUST00000185060 237 ntBASIC11.87□□□□□ -0.51
Rpl35aO55142 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.87□□□□□ -0.51
Rpl35aO55142 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.87□□□□□ -0.51
Rpl35aO55142 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rpl35aO55142 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpl35aO55142 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.86□□□□□ -0.51
Rpl35aO55142 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.86□□□□□ -0.51
Rpl35aO55142 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.86□□□□□ -0.51
Rpl35aO55142 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Rpl35aO55142 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.86□□□□□ -0.51
Rpl35aO55142 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpl35aO55142 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.86□□□□□ -0.51
Rpl35aO55142 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms