Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Gm13216-201ENSMUST00000117145 591 ntBASIC15.9■□□□□ 0.14
Scamp3O35609 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.9■□□□□ 0.14
Scamp3O35609 Gm5864-201ENSMUST00000202263 970 ntBASIC15.9■□□□□ 0.14
Scamp3O35609 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.9■□□□□ 0.14
Scamp3O35609 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Scamp3O35609 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Scamp3O35609 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.89■□□□□ 0.14
Scamp3O35609 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Scamp3O35609 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Gm15165-201ENSMUST00000118140 502 ntBASIC15.89■□□□□ 0.13
Scamp3O35609 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.89■□□□□ 0.13
Scamp3O35609 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.89■□□□□ 0.13
Scamp3O35609 Gm36967-201ENSMUST00000193814 266 ntBASIC15.89■□□□□ 0.13
Scamp3O35609 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.89■□□□□ 0.13
Scamp3O35609 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.89■□□□□ 0.13
Scamp3O35609 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Scamp3O35609 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Scamp3O35609 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Dancr-204ENSMUST00000132389 2347 ntBASIC15.88■□□□□ 0.13
Scamp3O35609 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.88■□□□□ 0.13
Scamp3O35609 Rprl3-201ENSMUST00000157400 290 ntBASIC15.88■□□□□ 0.13
Scamp3O35609 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.88■□□□□ 0.13
Scamp3O35609 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.88■□□□□ 0.13
Scamp3O35609 Gm27459-201ENSMUST00000184860 107 ntBASIC15.88■□□□□ 0.13
Scamp3O35609 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.88■□□□□ 0.13
Scamp3O35609 Birc2-201ENSMUST00000054878 378 ntBASIC15.88■□□□□ 0.13
Scamp3O35609 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Scamp3O35609 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Scamp3O35609 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.87■□□□□ 0.13
Scamp3O35609 Gm44454-201ENSMUST00000198541 138 ntBASIC15.87■□□□□ 0.13
Scamp3O35609 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.87■□□□□ 0.13
Scamp3O35609 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.87■□□□□ 0.13
Scamp3O35609 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.87■□□□□ 0.13
Scamp3O35609 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Scamp3O35609 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Scamp3O35609 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.86■□□□□ 0.13
Scamp3O35609 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 143.7 ms