Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptch2O35595 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptch2O35595 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptch2O35595 Gm4995-201ENSMUST00000117247 432 ntBASIC16.34■□□□□ 0.21
Ptch2O35595 Gm13036-201ENSMUST00000117799 748 ntBASIC16.34■□□□□ 0.21
Ptch2O35595 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.34■□□□□ 0.21
Ptch2O35595 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.34■□□□□ 0.21
Ptch2O35595 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.34■□□□□ 0.21
Ptch2O35595 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.34■□□□□ 0.21
Ptch2O35595 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.34■□□□□ 0.21
Ptch2O35595 AV026068-213ENSMUST00000223675 1171 ntBASIC16.34■□□□□ 0.21
Ptch2O35595 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.34■□□□□ 0.21
Ptch2O35595 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptch2O35595 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptch2O35595 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ptch2O35595 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptch2O35595 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ptch2O35595 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ptch2O35595 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptch2O35595 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ptch2O35595 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ptch2O35595 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ptch2O35595 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ptch2O35595 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptch2O35595 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.33■□□□□ 0.2
Ptch2O35595 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.33■□□□□ 0.2
Ptch2O35595 Gm12260-201ENSMUST00000122447 411 ntBASIC16.33■□□□□ 0.2
Ptch2O35595 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ptch2O35595 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.33■□□□□ 0.2
Ptch2O35595 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.33■□□□□ 0.2
Ptch2O35595 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ptch2O35595 Gm9172-201ENSMUST00000212092 954 ntBASIC16.33■□□□□ 0.2
Ptch2O35595 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.33■□□□□ 0.2
Ptch2O35595 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ptch2O35595 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ptch2O35595 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.33■□□□□ 0.2
Ptch2O35595 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptch2O35595 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptch2O35595 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ptch2O35595 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ptch2O35595 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptch2O35595 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptch2O35595 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptch2O35595 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.32■□□□□ 0.2
Ptch2O35595 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ptch2O35595 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.32■□□□□ 0.2
Ptch2O35595 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.32■□□□□ 0.2
Ptch2O35595 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Ptch2O35595 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.32■□□□□ 0.2
Ptch2O35595 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ptch2O35595 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.31■□□□□ 0.2
Ptch2O35595 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ptch2O35595 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.31■□□□□ 0.2
Ptch2O35595 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Gm15467-201ENSMUST00000120582 445 ntBASIC16.31■□□□□ 0.2
Ptch2O35595 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.31■□□□□ 0.2
Ptch2O35595 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.31■□□□□ 0.2
Ptch2O35595 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ptch2O35595 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ptch2O35595 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ptch2O35595 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ptch2O35595 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ptch2O35595 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ptch2O35595 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.3■□□□□ 0.2
Ptch2O35595 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ptch2O35595 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ptch2O35595 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms