Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clk2O35491 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.32■□□□□ 0.36
Clk2O35491 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Clk2O35491 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.32■□□□□ 0.36
Clk2O35491 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Gm13036-201ENSMUST00000117799 748 ntBASIC17.32■□□□□ 0.36
Clk2O35491 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.32■□□□□ 0.36
Clk2O35491 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Clk2O35491 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.32■□□□□ 0.36
Clk2O35491 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Clk2O35491 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clk2O35491 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clk2O35491 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clk2O35491 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clk2O35491 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.31■□□□□ 0.36
Clk2O35491 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Gm8344-201ENSMUST00000119813 856 ntBASIC17.31■□□□□ 0.36
Clk2O35491 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clk2O35491 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Clk2O35491 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.31■□□□□ 0.36
Clk2O35491 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clk2O35491 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.31■□□□□ 0.36
Clk2O35491 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.3■□□□□ 0.36
Clk2O35491 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Clk2O35491 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.3■□□□□ 0.36
Clk2O35491 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.3■□□□□ 0.36
Clk2O35491 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clk2O35491 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Clk2O35491 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Clk2O35491 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.29■□□□□ 0.36
Clk2O35491 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clk2O35491 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.29■□□□□ 0.36
Clk2O35491 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.29■□□□□ 0.36
Clk2O35491 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Gm5682-201ENSMUST00000173402 505 ntBASIC17.29■□□□□ 0.36
Clk2O35491 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Clk2O35491 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.29■□□□□ 0.36
Clk2O35491 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.29■□□□□ 0.36
Clk2O35491 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clk2O35491 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Clk2O35491 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clk2O35491 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clk2O35491 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clk2O35491 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clk2O35491 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms