Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC17.2■□□□□ 0.34
Clcn6O35454 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Clcn6O35454 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.2■□□□□ 0.34
Clcn6O35454 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Clcn6O35454 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
Clcn6O35454 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 AC132446.1-201ENSMUST00000222655 226 ntBASIC17.2■□□□□ 0.34
Clcn6O35454 AC117797.1-201ENSMUST00000223977 695 ntBASIC17.2■□□□□ 0.34
Clcn6O35454 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.2■□□□□ 0.34
Clcn6O35454 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Clcn6O35454 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Clcn6O35454 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Gm4732-201ENSMUST00000118778 473 ntBASIC17.19■□□□□ 0.34
Clcn6O35454 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Gm37517-201ENSMUST00000194004 1289 ntBASIC17.19■□□□□ 0.34
Clcn6O35454 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.19■□□□□ 0.34
Clcn6O35454 Gm44559-201ENSMUST00000207177 1012 ntBASIC17.19■□□□□ 0.34
Clcn6O35454 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC17.19■□□□□ 0.34
Clcn6O35454 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Clcn6O35454 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Clcn6O35454 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Clcn6O35454 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Clcn6O35454 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn6O35454 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Clcn6O35454 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clcn6O35454 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Clcn6O35454 Gm12085-201ENSMUST00000119263 940 ntBASIC17.18■□□□□ 0.34
Clcn6O35454 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Gm37024-201ENSMUST00000192224 868 ntBASIC17.18■□□□□ 0.34
Clcn6O35454 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Clcn6O35454 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clcn6O35454 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Clcn6O35454 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Clcn6O35454 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Clcn6O35454 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn6O35454 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn6O35454 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.17■□□□□ 0.34
Clcn6O35454 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.17■□□□□ 0.34
Clcn6O35454 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.17■□□□□ 0.34
Clcn6O35454 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms