Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ebf3O08791 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ebf3O08791 Gm11594-201ENSMUST00000122313 162 ntBASIC16.56■□□□□ 0.24
Ebf3O08791 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ebf3O08791 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Gm4535-201ENSMUST00000182274 558 ntBASIC16.56■□□□□ 0.24
Ebf3O08791 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.56■□□□□ 0.24
Ebf3O08791 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.56■□□□□ 0.24
Ebf3O08791 Gm8000-201ENSMUST00000188378 592 ntBASIC16.56■□□□□ 0.24
Ebf3O08791 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.56■□□□□ 0.24
Ebf3O08791 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Gm10355-201ENSMUST00000097146 517 ntBASIC16.56■□□□□ 0.24
Ebf3O08791 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ebf3O08791 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.56■□□□□ 0.24
Ebf3O08791 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.56■□□□□ 0.24
Ebf3O08791 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ebf3O08791 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ebf3O08791 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ebf3O08791 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ebf3O08791 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.55■□□□□ 0.24
Ebf3O08791 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ebf3O08791 Gm25990-201ENSMUST00000102440 86 ntBASIC16.55■□□□□ 0.24
Ebf3O08791 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.55■□□□□ 0.24
Ebf3O08791 Gm15173-201ENSMUST00000122049 433 ntBASIC16.55■□□□□ 0.24
Ebf3O08791 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.55■□□□□ 0.24
Ebf3O08791 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ebf3O08791 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.55■□□□□ 0.24
Ebf3O08791 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ebf3O08791 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ebf3O08791 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ebf3O08791 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ebf3O08791 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Ebf3O08791 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.54■□□□□ 0.24
Ebf3O08791 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.54■□□□□ 0.24
Ebf3O08791 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.54■□□□□ 0.24
Ebf3O08791 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ebf3O08791 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ebf3O08791 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ebf3O08791 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.53■□□□□ 0.24
Ebf3O08791 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.53■□□□□ 0.24
Ebf3O08791 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.53■□□□□ 0.24
Ebf3O08791 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.53■□□□□ 0.24
Ebf3O08791 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.53■□□□□ 0.24
Ebf3O08791 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.53■□□□□ 0.24
Ebf3O08791 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ebf3O08791 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ebf3O08791 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ebf3O08791 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ebf3O08791 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.52■□□□□ 0.24
Ebf3O08791 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ebf3O08791 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms