Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 App-207ENSMUST00000227737 2827 ntBASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Tnfrsf11bO08712 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Mir770-201ENSMUST00000103252 94 ntBASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tnfrsf11bO08712 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Gm9987-201ENSMUST00000069768 567 ntBASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tnfrsf11bO08712 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Gm10013-201ENSMUST00000106074 672 ntBASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnfrsf11bO08712 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms