Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp35M0QWN7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp35M0QWN7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.11■□□□□ 0.33
Usp35M0QWN7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.11■□□□□ 0.33
Usp35M0QWN7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp35M0QWN7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Usp35M0QWN7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Gm11452-201ENSMUST00000122376 690 ntBASIC17.1■□□□□ 0.33
Usp35M0QWN7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.1■□□□□ 0.33
Usp35M0QWN7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp35M0QWN7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Gm18195-201ENSMUST00000207604 706 ntBASIC17.09■□□□□ 0.33
Usp35M0QWN7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp35M0QWN7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp35M0QWN7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp35M0QWN7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Usp35M0QWN7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Usp35M0QWN7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp35M0QWN7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usp35M0QWN7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.08■□□□□ 0.32
Usp35M0QWN7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms