Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Shisa8J3QNX5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shisa8J3QNX5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shisa8J3QNX5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa8J3QNX5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa8J3QNX5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa8J3QNX5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa8J3QNX5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa8J3QNX5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa8J3QNX5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shisa8J3QNX5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Gm44450-201ENSMUST00000199528 114 ntBASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shisa8J3QNX5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shisa8J3QNX5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms