Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim34bJ3QNR8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Gm11764-201ENSMUST00000120221 623 ntBASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Gm9727-201ENSMUST00000161387 555 ntBASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Gm6257-201ENSMUST00000163864 910 ntBASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim34bJ3QNR8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Gm5682-201ENSMUST00000173402 505 ntBASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim34bJ3QNR8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim34bJ3QNR8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.7
Trim34bJ3QNR8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim34bJ3QNR8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim34bJ3QNR8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms