Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm7774-201ENSMUST00000200064 533 ntBASIC15.09■□□□□ 0.01
Colca2F8VPY8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.09■□□□□ 0.01
Colca2F8VPY8 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.09■□□□□ 0.01
Colca2F8VPY8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.09■□□□□ 0.01
Colca2F8VPY8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Colca2F8VPY8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Colca2F8VPY8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.08■□□□□ 0.01
Colca2F8VPY8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Colca2F8VPY8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.08■□□□□ 0.01
Colca2F8VPY8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Colca2F8VPY8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Colca2F8VPY8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Colca2F8VPY8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.08■□□□□ 0
Colca2F8VPY8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Colca2F8VPY8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.08■□□□□ 0
Colca2F8VPY8 Gm18057-201ENSMUST00000208220 503 ntBASIC15.08■□□□□ 0
Colca2F8VPY8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.08■□□□□ 0
Colca2F8VPY8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.08■□□□□ 0
Colca2F8VPY8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Colca2F8VPY8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Colca2F8VPY8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Colca2F8VPY8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Colca2F8VPY8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Colca2F8VPY8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Colca2F8VPY8 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.08■□□□□ 0
Colca2F8VPY8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Colca2F8VPY8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Colca2F8VPY8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Colca2F8VPY8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.07■□□□□ 0
Colca2F8VPY8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Colca2F8VPY8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.07■□□□□ 0
Colca2F8VPY8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.07■□□□□ 0
Colca2F8VPY8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.07■□□□□ 0
Colca2F8VPY8 Gm23547-201ENSMUST00000158210 271 ntBASIC15.07■□□□□ 0
Colca2F8VPY8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.07■□□□□ 0
Colca2F8VPY8 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.07■□□□□ 0
Colca2F8VPY8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Colca2F8VPY8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Colca2F8VPY8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Colca2F8VPY8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Colca2F8VPY8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.06■□□□□ 0
Colca2F8VPY8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Gm25287-201ENSMUST00000103846 110 ntBASIC15.06■□□□□ 0
Colca2F8VPY8 Gm22918-201ENSMUST00000103855 110 ntBASIC15.06■□□□□ 0
Colca2F8VPY8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.06■□□□□ 0
Colca2F8VPY8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Colca2F8VPY8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Colca2F8VPY8 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.06■□□□□ 0
Colca2F8VPY8 Gm9385-201ENSMUST00000117563 472 ntBASIC15.06■□□□□ 0
Colca2F8VPY8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.06■□□□□ 0
Colca2F8VPY8 Gm12428-201ENSMUST00000119844 727 ntBASIC15.06■□□□□ 0
Colca2F8VPY8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Mir6977-201ENSMUST00000184960 64 ntBASIC15.06■□□□□ 0
Colca2F8VPY8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.06■□□□□ 0
Colca2F8VPY8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.06■□□□□ 0
Colca2F8VPY8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Colca2F8VPY8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Colca2F8VPY8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.05■□□□□ 0
Colca2F8VPY8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Colca2F8VPY8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Colca2F8VPY8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Colca2F8VPY8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Colca2F8VPY8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.05■□□□□ -0
Colca2F8VPY8 Gm16198-201ENSMUST00000118766 670 ntBASIC15.05■□□□□ -0
Colca2F8VPY8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.05■□□□□ -0
Colca2F8VPY8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.05■□□□□ -0
Colca2F8VPY8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.05■□□□□ -0
Colca2F8VPY8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.05■□□□□ -0
Colca2F8VPY8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.05■□□□□ -0
Colca2F8VPY8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms