Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdh9F8VPK8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Gm10052-201ENSMUST00000168019 960 ntBASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Gm44430-201ENSMUST00000203376 995 ntBASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Gm7729-201ENSMUST00000050143 801 ntBASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdh9F8VPK8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdh9F8VPK8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdh9F8VPK8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh9F8VPK8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Gm10013-201ENSMUST00000106074 672 ntBASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Gm11355-201ENSMUST00000121120 306 ntBASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Gm13836-201ENSMUST00000121159 501 ntBASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh9F8VPK8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh9F8VPK8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms