Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh1F7BJK1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Mir5122-201ENSMUST00000175004 89 ntBASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdh1F7BJK1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh1F7BJK1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Gm11336-201ENSMUST00000118168 334 ntBASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh1F7BJK1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms